Antigen

Antigen Class

Input control

Antigen

Input control

Cell type

Cell type Class

Cell line

Cell type

Kc167

Source

e/se

Developmental Stage

dorsal closure stage

Sample

source_name

Kc167_input

cell line

Kc167

sample type

input

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

ChIP was performed as in Matzat LH, Dale RK, Moshkovich N, Lei EP (2012) Tissue-specific regulation of chromatin insulator function. PLoS Genet 8: e1003069 ChIP was performed as in Matzat LH, Dale RK, Moshkovich N, Lei EP (2012) Tissue-specific regulation of chromatin insulator function. PLoS Genet 8: e1003069. “a” or “b” in filenames indicates which of 2 chromatin preps was used

Sequencing Platform

instrument_model

Illumina HiSeq 2000

dm6

Number of total reads

22204822

Reads aligned (%)

91.7

Duplicates removed (%)

85.1

Number of peaks

4944 (qval < 1E-05)

dm3

Number of total reads

22204822

Reads aligned (%)

92.1

Duplicates removed (%)

81.7

Number of peaks

9370 (qval < 1E-05)