Antigen

Antigen Class

TFs and others

Antigen

PGR

Cell type

Cell type Class

Breast

Cell type

T-47D

Primary Tissue

Breast

Tissue Diagnosis

Adenocarcinoma Ductal

Sample

source_name

T47D cells

cell line

T47D

cell type

breast cancer cell line

passages

5-8

chip antibody

PR

chip antibody manufacturer

Santa Cruz

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Trizol extraction for RNA and ChIPs with an antibody against the progesterone receptor for immunoprecipitated DNA RNA and DNA libraries were prepared for sequencing using standard Illumina protocols

Sequencing Platform

instrument_model

Illumina Genome Analyzer

hg38

Number of total reads

21612818

Reads aligned (%)

53.2

Duplicates removed (%)

76.9

Number of peaks

101 (qval < 1E-05)

hg19

Number of total reads

21612818

Reads aligned (%)

52.7

Duplicates removed (%)

77.6

Number of peaks

103 (qval < 1E-05)