Antigen

Antigen Class

TFs and others

Antigen

VDR

Cell type

Cell type Class

Blood

Cell type

THP-1

Primary Tissue

Blood

Tissue Diagnosis

Leukemia Acute Myelogenous

Sample

source_name

THP-1 cells, differentiated to M2-type macrophages

cell line

THP-1

treatment

1,25D

treatment time

1 h

antibody

VDR

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Standard protocol as suggested by the manufacturer for ChIP-seq libraries as utilized at the EMBL Gene Core in Heidelberg, Germany

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

hg19

Number of total reads

55722293

Reads aligned (%)

97.8

Duplicates removed (%)

37.0

Number of peaks

1333 (qval < 1E-05)

hg38

Number of total reads

55722293

Reads aligned (%)

98.9

Duplicates removed (%)

35.5

Number of peaks

1318 (qval < 1E-05)