Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
AGO2

Cell type

Cell type Class
Cell line
Cell type
S2
Source
Oregon R
Developmental Stage
late embryonic stage

Attributes by original data submitter

Sample

source_name
S2 cells
chip antibody
Mouse monoclonal to Ago2, gift from M. Siomi
cell line
S2

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Standard Illumina library construction

Sequencing Platform

instrument_model
Illumina HiSeq 1000

dm3

Number of total reads
28015255
Reads aligned (%)
73.0
Duplicates removed (%)
14.5
Number of peaks
3926 (qval < 1E-05)

dm6

Number of total reads
28015255
Reads aligned (%)
72.8
Duplicates removed (%)
16.5
Number of peaks
3807 (qval < 1E-05)

Base call quality data from DBCLS SRA