Antigen

Antigen Class

TFs and others

Antigen

MEIS1

Cell type

Cell type Class

Bone

Cell type

A-673

Primary Tissue

Skeletal Muscle

Tissue Diagnosis

Rhabdomyosarcoma

Sample

source_name

Ewing sarcoma cells

cell line

A673

cell type

Ewing sarcoma

chip antibody

MEIS1 (Abcam, ab19867)

cell number

20,000,000

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Cell lysates were clarified from sonicated nuclei and MEIS1-DNA complexes were isolated with antibody.

Sequencing Platform

instrument_model

Illumina HiSeq 3000

hg19

Number of total reads

29854351

Reads aligned (%)

35.6

Duplicates removed (%)

54.5

Number of peaks

939 (qval < 1E-05)

hg38

Number of total reads

29854351

Reads aligned (%)

37.1

Duplicates removed (%)

53.0

Number of peaks

939 (qval < 1E-05)