Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
SMARCC1

Cell type

Cell type Class
Blood
Cell type
Bone marrow nuclear cells
NA
NA

Attributes by original data submitter

Sample

source_name
AML patient 3 bone marrow nuclear cells
tissue
Bone marrow
chip antibody
BAF155 (R-18) (Santa Cruz Biotechnology, Cat. sc-9746, Lot B1513)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg19

Number of total reads
23456143
Reads aligned (%)
53.4
Duplicates removed (%)
72.2
Number of peaks
249 (qval < 1E-05)

hg38

Number of total reads
23456143
Reads aligned (%)
56.0
Duplicates removed (%)
71.3
Number of peaks
499 (qval < 1E-05)

Base call quality data from DBCLS SRA