Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
SMARCC1

Cell type

Cell type Class
Blood
Cell type
Bone marrow nuclear cells
NA
NA

Attributes by original data submitter

Sample

source_name
AML patient 1 bone marrow nuclear cells
tissue
Bone marrow
chip antibody
BAF155 (R-18) (Santa Cruz Biotechnology, Cat. sc-9746, Lot B1513)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
26406781
Reads aligned (%)
98.3
Duplicates removed (%)
28.5
Number of peaks
976 (qval < 1E-05)

hg19

Number of total reads
26406781
Reads aligned (%)
97.2
Duplicates removed (%)
28.9
Number of peaks
439 (qval < 1E-05)

Base call quality data from DBCLS SRA