Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Blood
Cell type
CH12
Tissue
Blood
Lineage
cellLine
Description
B-cell lymphoma (GM12878 analog)

Attributes by original data submitter

Sample

cell_line
CH12
cell_type
murine B cell lymphoma cell line
label
activated CH12

Sequenced DNA Library

library_name
mouse activated CH12, PolII
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

mm10

Number of total reads
56366229
Reads aligned (%)
89.3
Duplicates removed (%)
57.9
Number of peaks
17976 (qval < 1E-05)

mm9

Number of total reads
56366229
Reads aligned (%)
89.1
Duplicates removed (%)
57.9
Number of peaks
17922 (qval < 1E-05)

Base call quality data from DBCLS SRA