Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
IKZF1

Cell type

Cell type Class
Blood
Cell type
Pre-B cells
NA
NA

Attributes by original data submitter

Sample

source_name
pre-B cell line
chip antibody catalog/vendor
ab26083, Abcam
antibody
IKAROS

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg19

Number of total reads
27922422
Reads aligned (%)
86.9
Duplicates removed (%)
10.4
Number of peaks
49864 (qval < 1E-05)

hg38

Number of total reads
27922422
Reads aligned (%)
89.2
Duplicates removed (%)
9.2
Number of peaks
50146 (qval < 1E-05)

Base call quality data from DBCLS SRA