Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
SSRP1

Cell type

Cell type Class
Bone
Cell type
HT-1080
Primary Tissue
Bone
Tissue Diagnosis
Fibrosarcoma

Attributes by original data submitter

Sample

source_name
HT1080_control
cell line
HT1080
treated with
none (control)
time of treatment
1.5 hr
chip antibody
SSRP1 antibody
chip antibody vendor
BioLegend
chip antibody clone
10D1

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg19

Number of total reads
52931348
Reads aligned (%)
96.4
Duplicates removed (%)
34.1
Number of peaks
6931 (qval < 1E-05)

hg38

Number of total reads
52931348
Reads aligned (%)
96.6
Duplicates removed (%)
33.9
Number of peaks
6792 (qval < 1E-05)

Base call quality data from DBCLS SRA