Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Spi1

Cell type

Cell type Class
Blood
Cell type
Myeloid Cells
MeSH Description
The classes of BONE MARROW-derived blood cells in the monocytic series (MONOCYTES and their precursors) and granulocytic series (GRANULOCYTES and their precursors).

Attributes by original data submitter

Sample

source_name
myeloid precursors treated with RANKL for 36h
strain
C57BLACK6
age
4-6 weeks
cell type
Bone marrow myeloid cells
treated with
CSF1 and RANKL for 36h
chip antibody
PU.1 antibody; In lab described in PMID:17403683

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
18506551
Reads aligned (%)
63.9
Duplicates removed (%)
11.7
Number of peaks
39439 (qval < 1E-05)

mm9

Number of total reads
18506551
Reads aligned (%)
63.8
Duplicates removed (%)
11.8
Number of peaks
39507 (qval < 1E-05)

Base call quality data from DBCLS SRA