Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
SIRT7

Cell type

Cell type Class
Blood
Cell type
K-562
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Chronic Myelogenous

Attributes by original data submitter

Sample

source_name
K562
cell line
K562
genotype
wild type
chip antibody
SIRT7 (Cell Signalling, 5360, Lot 1)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
25079570
Reads aligned (%)
99.0
Duplicates removed (%)
45.5
Number of peaks
1043 (qval < 1E-05)

hg19

Number of total reads
25079570
Reads aligned (%)
97.9
Duplicates removed (%)
46.6
Number of peaks
421 (qval < 1E-05)

Base call quality data from DBCLS SRA