Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27ac

Cell type

Cell type Class
Blood
Cell type
MV-4-11
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Acute Myelogenous

Attributes by original data submitter

Sample

source_name
MV-411
cell line
MV-411
cell type
leukemia cell line
treatment
MYBMIM peptide
chip antibody
H3K27ac Rabbit polyclonal antibody (Abcam, #4729)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
ChIP-seq libraries were constructed with the NEBNext ChIP-seq library prep kit following the manufacturer's recommended protocol (New England Biolabs, Ipswich, MA, USA).

Sequencing Platform

instrument_model
Illumina HiSeq 2500

hg38

Number of total reads
16561207
Reads aligned (%)
97.3
Duplicates removed (%)
1.6
Number of peaks
609 (qval < 1E-05)

hg19

Number of total reads
16561207
Reads aligned (%)
96.4
Duplicates removed (%)
2.8
Number of peaks
748 (qval < 1E-05)

Base call quality data from DBCLS SRA