Antigen

Antigen Class

Input control

Antigen

Input control

Cell type

Cell type Class

Cell line

Cell type

S2R+

Source

Oregon R

Developmental Stage

late embryonic stage

Sample

source_name

ChIP Seq of Input Ctrl

cell line

S2R+

cell type

Embryonic

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

DNA was recovered after reverse crosslinking and phenol chloroform extraction. After precipitating and pelleting, DNA was dissolved in 30 _l of TE After checking enrichment the recovered DNA was converted into libraries using NebNext Ultra DNA library preperation kit, following manufacturer's protocol NebNext UltraII

Sequencing Platform

instrument_model

NextSeq 500

dm6

Number of total reads

42731198

Reads aligned (%)

92.5

Duplicates removed (%)

14.6

Number of peaks

3461 (qval < 1E-05)

dm3

Number of total reads

42731198

Reads aligned (%)

94.3

Duplicates removed (%)

14.6

Number of peaks

6128 (qval < 1E-05)