Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Runx3

Cell type

Cell type Class
Blood
Cell type
CD8+ T cells
NA
NA

Attributes by original data submitter

Sample

source_name
Splenic CD8+ T cells
cell type
Splenic CD8+ T cells
passages
Collected from 18 mice. Cells were freshly isolated, fixed and frozen at -80°C.
strain
ICR
chip antibody
Runx3 poly clonal home made

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
22654611
Reads aligned (%)
96.0
Duplicates removed (%)
60.0
Number of peaks
335 (qval < 1E-05)

mm9

Number of total reads
22654611
Reads aligned (%)
95.7
Duplicates removed (%)
60.1
Number of peaks
429 (qval < 1E-05)

Base call quality data from DBCLS SRA