Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Hr78

Cell type

Cell type Class
Embryo
Cell type
8-16h embryos
NA
NA

Attributes by original data submitter

Sample

source_name
Hr78-GFP
developmental stage
E8-16
fraction
ChIP
replicate
2
transcription factor
Hr78
antibody name
Anti-GFP
antibody manufacturer
Abcam
antibody catalog number
ab290

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

dm3

Number of total reads
28429556
Reads aligned (%)
50.2
Duplicates removed (%)
21.5
Number of peaks
0 (qval < 1E-05)

dm6

Number of total reads
28429556
Reads aligned (%)
48.3
Duplicates removed (%)
23.9
Number of peaks
1134 (qval < 1E-05)

Base call quality data from DBCLS SRA