Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
INTS13

Cell type

Cell type Class
Blood
Cell type
Monocytes
MeSH Description
Large, phagocytic mononuclear leukocytes produced in the vertebrate BONE MARROW and released into the BLOOD; contain a large, oval or somewhat indented nucleus surrounded by voluminous cytoplasm and numerous organelles.

Attributes by original data submitter

Sample

source_name
in vitro differentiated monocytes (from fetal liver CD34+ cells)
chip antibody
INTS13
cell type
in vitro differentiated monocytes (cord blood CD34+ derived)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
NEBNext ChIP-Seq ULTRAII DNA Sample Prep Kit (New England Biolabs, inc.)

Sequencing Platform

instrument_model
NextSeq 500

hg19

Number of total reads
19887972
Reads aligned (%)
74.4
Duplicates removed (%)
11.5
Number of peaks
5749 (qval < 1E-05)

hg38

Number of total reads
19887972
Reads aligned (%)
76.7
Duplicates removed (%)
9.7
Number of peaks
5833 (qval < 1E-05)

Base call quality data from DBCLS SRA