Antigen

Antigen Class

Input control

Antigen

Input control

Cell type

Cell type Class

Adipocyte

Cell type

Colon, Transverse

MeSH Description

The segment of LARGE INTESTINE between ASCENDING COLON and DESCENDING COLON. It passes from the RIGHT COLIC FLEXURE across the ABDOMEN, then turns sharply at the left colonic flexure into the descending colon.

Sample

sex

male

tissue

transverse colon

lab

Michael Snyder, Stanford

sample_type

tissue

age

54 year

donor ID

ENCDO451RUA

dev_stage

adult

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

not provided

Sequencing Platform

instrument_model

Illumina HiSeq 4000

hg38

Number of total reads

62549037

Reads aligned (%)

95.3

Duplicates removed (%)

19.5

Number of peaks

1951 (qval < 1E-05)

hg19

Number of total reads

62549037

Reads aligned (%)

94.1

Duplicates removed (%)

19.7

Number of peaks

943 (qval < 1E-05)