Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Digestive tract
Cell type
Gastroesophageal sphincter
NA
NA

Attributes by original data submitter

Sample

sex
male
tissue
gastroesophageal sphincter
lab
Richard Myers, HAIB
sample_type
tissue
age
37 year
donor ID
ENCDO845WKR
dev_stage
adult

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
extraction method: see document

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg38

Number of total reads
37684076
Reads aligned (%)
92.6
Duplicates removed (%)
2.2
Number of peaks
4730 (qval < 1E-05)

hg19

Number of total reads
37684076
Reads aligned (%)
91.6
Duplicates removed (%)
2.5
Number of peaks
4217 (qval < 1E-05)

Base call quality data from DBCLS SRA