Antigen

Antigen Class

Input control

Antigen

Input control

Cell type

Cell type Class

Adipocyte

Cell type

Colon, Transverse

MeSH Description

The segment of LARGE INTESTINE between ASCENDING COLON and DESCENDING COLON. It passes from the RIGHT COLIC FLEXURE across the ABDOMEN, then turns sharply at the left colonic flexure into the descending colon.

Sample

sex

female

tissue

transverse colon

lab

Richard Myers, HAIB

sample_type

tissue

age

53 year

donor ID

ENCDO793LXB

dev_stage

adult

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

extraction method: see document

Sequencing Platform

instrument_model

Illumina HiSeq 2000

hg38

Number of total reads

53826369

Reads aligned (%)

89.2

Duplicates removed (%)

2.2

Number of peaks

4043 (qval < 1E-05)

hg19

Number of total reads

53826369

Reads aligned (%)

88.4

Duplicates removed (%)

2.4

Number of peaks

3449 (qval < 1E-05)