Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
Peyers Patches
NA
NA

Attributes by original data submitter

Sample

sex
female
tissue
Peyer's patch
lab
Michael Snyder, Stanford
sample_type
tissue
age
51 year
donor ID
ENCDO271OUW
dev_stage
adult

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
39113627
Reads aligned (%)
97.7
Duplicates removed (%)
4.2
Number of peaks
1735 (qval < 1E-05)

hg19

Number of total reads
39113627
Reads aligned (%)
96.4
Duplicates removed (%)
4.6
Number of peaks
664 (qval < 1E-05)

Base call quality data from DBCLS SRA