Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
HNF4G

Cell type

Cell type Class
Liver
Cell type
Liver
MeSH Description
A large lobed glandular organ in the abdomen of vertebrates that is responsible for detoxification, metabolism, synthesis and storage of various substances.

Attributes by original data submitter

Sample

age
4 year
dev stage
child
donor ID
ENCDO882MMZ
tissue
liver
sex
female
health state
healthy
sample type
tissue
lab
Michael Snyder, Stanford

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
not provided

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg38

Number of total reads
42610324
Reads aligned (%)
98.2
Duplicates removed (%)
5.9
Number of peaks
13409 (qval < 1E-05)

hg19

Number of total reads
42610324
Reads aligned (%)
97.4
Duplicates removed (%)
7.0
Number of peaks
13298 (qval < 1E-05)

Base call quality data from DBCLS SRA