Antigen

Antigen Class

TFs and others

Antigen

HSF1

Cell type

Cell type Class

Blood

Cell type

GM12878

Tissue

blood

Lineage

mesoderm

Description

B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus

Sample

dev stage

adult

cell line

GM12878

sex

female

sample type

immortalized cell line

donor ID

ENCDO000AAK

age

unknown

health state

unknown

lab

Michael Snyder, Stanford

Sequenced DNA Library

library_name

ERROR: cannot retrieve data from NCBI: too many requests

library_strategy

ERROR: cannot retrieve data from NCBI: too many requests

library_source

ERROR: cannot retrieve data from NCBI: too many requests

library_selection

ERROR: cannot retrieve data from NCBI: too many requests

library_construction_protocol

ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model

ERROR: cannot retrieve data from NCBI: too many requests

cycle_sequence

ERROR: cannot retrieve data from NCBI: too many requests

cycle_count

ERROR: cannot retrieve data from NCBI: too many requests

flow_sequence

ERROR: cannot retrieve data from NCBI: too many requests

flow_count

ERROR: cannot retrieve data from NCBI: too many requests

key_sequence

ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads

30759949

Reads aligned (%)

97.5

Duplicates removed (%)

12.8

Number of peaks

687 (qval < 1E-05)

hg19

Number of total reads

30759949

Reads aligned (%)

96.5

Duplicates removed (%)

13.9

Number of peaks

1119 (qval < 1E-05)