SRX331347
GSM1195421: seq-ab12181 H3K9acS10 873968 N2 L3 ChIP Rep1; Caenorhabditis elegans; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K9acS10ph

Cell type

Cell type Class
Larvae
Cell type
L3
NA
NA

Attributes by original data submitter

Sample

source_name
seq-ab12181_H3K9acS10_873968_N2_L3_ChIP_Rep1
strain
N2
developmental stage
L3 Larva
genotype
wild type
sex type
mixed Male and Hermaphrodite population

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

Where can I get the processing logs?

Read processing pipeline log

ce11

Number of total reads
21734629
Reads aligned (%)
95.4
Duplicates removed (%)
55.2
Number of peaks
1004 (qval < 1E-05)

ce10

Number of total reads
21734629
Reads aligned (%)
95.4
Duplicates removed (%)
55.2
Number of peaks
1002 (qval < 1E-05)

Base call quality data from DBCLS SRA