Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Uterus
Cell type
Pregnant uterus
NA
NA

Attributes by original data submitter

Sample

source_name
pregnant uterus, inter-implantation sites
strain
B6CBAF1/J
tissue/cell
whole tissue from inter-implantation sites
embryonic day
E7.5
ChIP
input

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
25341607
Reads aligned (%)
95.1
Duplicates removed (%)
12.5
Number of peaks
373 (qval < 1E-05)

mm9

Number of total reads
25341607
Reads aligned (%)
94.9
Duplicates removed (%)
12.6
Number of peaks
416 (qval < 1E-05)

Base call quality data from DBCLS SRA