Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27ac

Cell type

Cell type Class
Blood
Cell type
Monocytes-CD14+
Tissue
monocytes
Lineage
mesoderm
Description
Monocytes-CD14+ are CD14-positive cells from human leukapheresis production, from donor RO 01746 (draw 1 ID is RO 01746, draw 2 ID is RO 01826), newly promoted to tier 2: not in 2011 analysis

Attributes by original data submitter

Sample

sex
not collected
cell type
CD14-positive monocyte
lab
Manuel Garber, UMass
sample_type
primary cell
age
unknown
donor ID
ENCDO984LDA
dev_stage
unknown

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
not provided

Sequencing Platform

instrument_model
NextSeq 500

hg38

Number of total reads
10784095
Reads aligned (%)
96.2
Duplicates removed (%)
7.4
Number of peaks
24464 (qval < 1E-05)

hg19

Number of total reads
10784095
Reads aligned (%)
95.9
Duplicates removed (%)
7.5
Number of peaks
24408 (qval < 1E-05)

Base call quality data from DBCLS SRA