SRX3293414
GSM2817940: Dmel CidM 5m IP (20160125 PT Dm 5min IP 0720); Drosophila melanogaster; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Cell line
Cell type
S2-DRSC
Source
Oregon R
Developmental Stage
late embryonic stage

Attributes by original data submitter

Sample

source_name
S2-DRSC cells;anti-CidM
cell type
S2-DRSC cells
antibody
anti-CidM

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Drosophila_ChIP_protocol.rtf PMID 25827087

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

dm3

Number of total reads
21038377
Reads aligned (%)
63.1
Duplicates removed (%)
22.5
Number of peaks
2190 (qval < 1E-05)

dm6

Number of total reads
21038377
Reads aligned (%)
62.1
Duplicates removed (%)
24.0
Number of peaks
1242 (qval < 1E-05)

Base call quality data from DBCLS SRA