SRX3293407
GSM2817934: Dmel CidH 5m IP (20170502 PT DmSc Cid8 IP0418); Drosophila melanogaster; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Cell line
Cell type
S2-DRSC
Source
Oregon R
Developmental Stage
late embryonic stage

Attributes by original data submitter

Sample

source_name
S2-DRSC cells;anti-CidH
cell type
S2-DRSC cells
antibody
anti-CidH

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Drosophila_ChIP_protocol.rtf PMID 25827087

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
12640689
Reads aligned (%)
96.0
Duplicates removed (%)
14.9
Number of peaks
1259 (qval < 1E-05)

dm3

Number of total reads
12640689
Reads aligned (%)
96.6
Duplicates removed (%)
13.5
Number of peaks
919 (qval < 1E-05)

Base call quality data from DBCLS SRA