Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
PCID2

Cell type

Cell type Class
Embryo
Cell type
0-24h embryos
NA
NA

Attributes by original data submitter

Sample

source_name
0-24 hr;P[Cid-GFP]8-10;embryos;anti-GFP
cell type
0-24 hr;P[Cid-GFP]8-10;embryos
antibody
anti-GFP

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Drosophila ChIP_protocol.rtf PMID 25827087

Sequencing Platform

instrument_model
Illumina HiSeq 2500

dm3

Number of total reads
17349130
Reads aligned (%)
132.0
Duplicates removed (%)
14.5
Number of peaks
1488 (qval < 1E-05)

dm6

Number of total reads
17349130
Reads aligned (%)
128.5
Duplicates removed (%)
16.1
Number of peaks
1284 (qval < 1E-05)

Base call quality data from DBCLS SRA