Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
gfzf

Cell type

Cell type Class
Cell line
Cell type
S2R+
Source
Oregon R
Developmental Stage
late embryonic stage

Attributes by original data submitter

Sample

source_name
S2R+
antibody
GFZF

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Lysates were clarified from sonicated nuclei and protein-DNA complexes were isolated with rabbit IgG antibody.

Sequencing Platform

instrument_model
NextSeq 500

dm3

Number of total reads
36361861
Reads aligned (%)
87.8
Duplicates removed (%)
79.7
Number of peaks
8160 (qval < 1E-05)

dm6

Number of total reads
36361861
Reads aligned (%)
86.0
Duplicates removed (%)
84.3
Number of peaks
3388 (qval < 1E-05)

Base call quality data from DBCLS SRA