Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
M1BP

Cell type

Cell type Class
Cell line
Cell type
S2R+
Source
Oregon R
Developmental Stage
late embryonic stage

Attributes by original data submitter

Sample

source_name
S2R+
antibody
M1BP

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Lysates were clarified from sonicated nuclei and protein-DNA complexes were isolated with rabbit IgG antibody.

Sequencing Platform

instrument_model
NextSeq 500

dm3

Number of total reads
53826003
Reads aligned (%)
37.6
Duplicates removed (%)
78.2
Number of peaks
11980 (qval < 1E-05)

dm6

Number of total reads
53826003
Reads aligned (%)
30.9
Duplicates removed (%)
81.8
Number of peaks
6896 (qval < 1E-05)

Base call quality data from DBCLS SRA