Antigen

Antigen Class

TFs and others

Antigen

KDM2B

Cell type

Cell type Class

Pluripotent stem cell

Cell type

hESC H1

NA

NA

Sample

source_name

Cultured Human Embryonic Stem Cells

cell type

H1 hESC

genotype

RNF2-R

media

mTeSR (StemCell Technolgies)

media supplement

1micro/ml Doxycyclin

antibody

KDM2B (rabbit A) (Beguelin et al, 2016, Gearhart et al, 2006)

fixation strategy

ethylene glycol bis(succinimidyl succinate) + formaldehyde

sonication strategy

Covaris S220

Sequenced DNA Library

library_name

ERROR: cannot retrieve data from NCBI: too many requests

library_strategy

ERROR: cannot retrieve data from NCBI: too many requests

library_source

ERROR: cannot retrieve data from NCBI: too many requests

library_selection

ERROR: cannot retrieve data from NCBI: too many requests

library_construction_protocol

ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model

ERROR: cannot retrieve data from NCBI: too many requests

cycle_sequence

ERROR: cannot retrieve data from NCBI: too many requests

cycle_count

ERROR: cannot retrieve data from NCBI: too many requests

flow_sequence

ERROR: cannot retrieve data from NCBI: too many requests

flow_count

ERROR: cannot retrieve data from NCBI: too many requests

key_sequence

ERROR: cannot retrieve data from NCBI: too many requests

hg19

Number of total reads

30751385

Reads aligned (%)

85.0

Duplicates removed (%)

11.8

Number of peaks

37923 (qval < 1E-05)

hg38

Number of total reads

30751385

Reads aligned (%)

86.4

Duplicates removed (%)

10.7

Number of peaks

37968 (qval < 1E-05)