Antigen

Antigen Class

TFs and others

Antigen

PCGF1

Cell type

Cell type Class

Pluripotent stem cell

Cell type

hESC H1

NA

NA

Sample

source_name

Cultured Human Embryonic Stem Cells

cell type

H1 hESC

genotype

WT

media

mTeSR (StemCell Technolgies)

media supplement

NA

antibody

PCGF1 (Oliviero, 2015, Gearhart et al, 2006)

fixation strategy

ethylene glycol bis(succinimidyl succinate) + formaldehyde

sonication strategy

Covaris S220

Sequenced DNA Library

library_name

ERROR: cannot retrieve data from NCBI: too many requests

library_strategy

ERROR: cannot retrieve data from NCBI: too many requests

library_source

ERROR: cannot retrieve data from NCBI: too many requests

library_selection

ERROR: cannot retrieve data from NCBI: too many requests

library_construction_protocol

ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model

ERROR: cannot retrieve data from NCBI: too many requests

cycle_sequence

ERROR: cannot retrieve data from NCBI: too many requests

cycle_count

ERROR: cannot retrieve data from NCBI: too many requests

flow_sequence

ERROR: cannot retrieve data from NCBI: too many requests

flow_count

ERROR: cannot retrieve data from NCBI: too many requests

key_sequence

ERROR: cannot retrieve data from NCBI: too many requests

hg19

Number of total reads

21187649

Reads aligned (%)

79.0

Duplicates removed (%)

16.3

Number of peaks

25160 (qval < 1E-05)

hg38

Number of total reads

21187649

Reads aligned (%)

80.2

Duplicates removed (%)

15.4

Number of peaks

25241 (qval < 1E-05)