Antigen

Antigen Class

TFs and others

Antigen

ARID1A

Cell type

Cell type Class

Gonad

Cell type

RMG-I

Primary Tissue

Ovary

Tissue Diagnosis

Carcinoma

Sample

source_name

ARID1A was profiled in parental RMG-1

cell line

RMG-1

chip antibody

Abcam ab182560

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

NEBNext ChIP-Seq ULTRAII DNA Sample Prep Kit (New England Biolabs, inc.)

Sequencing Platform

instrument_model

NextSeq 500

hg38

Number of total reads

93365182

Reads aligned (%)

95.2

Duplicates removed (%)

7.1

Number of peaks

1523 (qval < 1E-05)

hg19

Number of total reads

93365182

Reads aligned (%)

94.7

Duplicates removed (%)

8.4

Number of peaks

1126 (qval < 1E-05)