Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
MED1

Cell type

Cell type Class
Others
Cell type
Mesenchymal stem cells
NA
NA

Attributes by original data submitter

Sample

source_name
hMSC-TERT4_MED1_D14
cell line
hMSC-TERT4
differentiation stage
D14
chip antibody
MED1/TRAP220 antibody (M-255) Cat# SC-8998

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg19

Number of total reads
26337082
Reads aligned (%)
97.7
Duplicates removed (%)
18.7
Number of peaks
13261 (qval < 1E-05)

hg38

Number of total reads
26337082
Reads aligned (%)
98.7
Duplicates removed (%)
16.8
Number of peaks
13397 (qval < 1E-05)

Base call quality data from DBCLS SRA