Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
ASCL1

Cell type

Cell type Class
Epidermis
Cell type
Dermal fibroblast
NA
NA

Attributes by original data submitter

Sample

source_name
human dermal fibroblasts
cell type
human dermal fibroblasts
strain
C57BL/6
antibody
Ascl1 (ab74065)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
The isolated DNA was RNase treated and purified using Qiagen columns. For sequencing libraries we followed Illumina’s protocol.

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg19

Number of total reads
130625688
Reads aligned (%)
14.5
Duplicates removed (%)
80.4
Number of peaks
21603 (qval < 1E-05)

hg38

Number of total reads
130625688
Reads aligned (%)
14.9
Duplicates removed (%)
79.9
Number of peaks
21305 (qval < 1E-05)

Base call quality data from DBCLS SRA