Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
ESR1

Cell type

Cell type Class
Breast
Cell type
Breast cancer
NA
NA

Attributes by original data submitter

Sample

source_name
Human breast tumor
antibody
ER
patient id
Male_1
tissue
Human breast tumor
Sex
male

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg19

Number of total reads
21011611
Reads aligned (%)
89.1
Duplicates removed (%)
5.6
Number of peaks
5313 (qval < 1E-05)

hg38

Number of total reads
21011611
Reads aligned (%)
90.4
Duplicates removed (%)
4.7
Number of peaks
5296 (qval < 1E-05)

Base call quality data from DBCLS SRA