Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
K-562
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Chronic Myelogenous

Attributes by original data submitter

Sample

source_name
K562_TALE-3XFlag_input
cell line
K562
cell type
erythrocytic leukaemia cells
transfected with
20ug TALE:3X Flag Plasmid
chip antibody
none

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina MiSeq

hg38

Number of total reads
2181646
Reads aligned (%)
97.4
Duplicates removed (%)
6.1
Number of peaks
55 (qval < 1E-05)

hg19

Number of total reads
2181646
Reads aligned (%)
96.6
Duplicates removed (%)
6.9
Number of peaks
50 (qval < 1E-05)

Base call quality data from DBCLS SRA