Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
MPHOSPH8

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

source_name
ChIP:MPP8_Cell_hESC:WT
cell line
hESC
cell type
Human embryonic stem cell lines
genotype/variation
wild type
chip antibody
MPP8 (16796-1-AP, Protein Technologies Inc)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
79712081
Reads aligned (%)
98.1
Duplicates removed (%)
39.6
Number of peaks
2089 (qval < 1E-05)

hg19

Number of total reads
79712081
Reads aligned (%)
97.0
Duplicates removed (%)
40.1
Number of peaks
977 (qval < 1E-05)

Base call quality data from DBCLS SRA