Curated Sample Data


Genome
dm3
Antigen Class
Input control
Antigen
Input control
Cell type Class
Cell line
Cell type
Kc167

Cell type information


Source
e/se
Developmental Stage
dorsal closure stage

Attributes by Original Data Submitter


source_name
Kc167 cells, dsCLAMP, input
cell line
Kc167
treatment
dsCLAMP
chip antibody
none

Metadata from Sequence Read Archive

Library Description


library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
ChIP-seq was performed as described previously (Matzat et al., 2012). ChIP-seq library was prepared as described previously (Matzat et al., 2012).

Platform Information


instrument_model
Illumina HiSeq 2500

External Database Query

Logs in read processing pipeline


Number of total reads
22091417
Reads aligned (%)
94.2
Duplicates removed (%)
11.3
Number of peaks
2035 (qval < 1E-05)

Sequence Quality Data from DBCLS SRA