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For dm3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For dm6
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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For dm3
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For dm6
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For dm3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For dm6
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: su(Hw)
wikigenes
PDBj
CellType: Kc167
ATCC
MeSH
RIKEN BRC
SRX3167240
GSM2775107: Kc167 mock suhw 0; Drosophila melanogaster; ChIP-Seq
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
TFs and others
Antigen
su(Hw)
Cell type
Cell type Class
Cell line
Cell type
Kc167
Source
e/se
Developmental Stage
dorsal closure stage
Attributes by original data submitter
Sample
source_name
Kc167 cells, mock, suhw ChIP
cell line
Kc167
treatment
mock
chip antibody
suhw
Sequenced DNA Library
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
ChIP-seq was performed as described previously (Matzat et al., 2012). ChIP-seq library was prepared as described previously (Matzat et al., 2012).
Sequencing Platform
instrument_model
Illumina HiSeq 2500
Where can I get the processing logs?
Read processing pipeline
log
dm3
Number of total reads
32185369
Reads aligned (%)
11.0
Duplicates removed (%)
84.0
Number of peaks
7388 (qval < 1E-05)
dm6
Number of total reads
32185369
Reads aligned (%)
9.1
Duplicates removed (%)
86.6
Number of peaks
4981 (qval < 1E-05)
Base call quality data from
DBCLS SRA