Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Larvae
Cell type
L4
NA
NA

Attributes by original data submitter

Sample

source_name
Whole worms
strain/genotype
N2 (wild-type)
developmental stage
L4
replicate
2

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Crosslinked, sonicated and purified using (A-11122, Thermo Fisher Scientific) Library was prepared using the NEBNext Ultra DNA Library Prep Kit for Illumina (NEB).

Sequencing Platform

instrument_model
Illumina HiSeq 2500

ce11

Number of total reads
21658245
Reads aligned (%)
32.1
Duplicates removed (%)
73.8
Number of peaks
513 (qval < 1E-05)

ce10

Number of total reads
21658245
Reads aligned (%)
32.1
Duplicates removed (%)
73.8
Number of peaks
513 (qval < 1E-05)

Base call quality data from DBCLS SRA