Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
CEBPA

Cell type

Cell type Class
Blood
Cell type
Kasumi-1
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Acute Myelogenous

Attributes by original data submitter

Sample

source_name
CEBPA ChIP with inducible version of CEBPA (C/EBPα-ER) treated with E2 (estradiol)
cell type
Kasumi-1 cells
genotype
inducible version of CEBPA (C/EBPalpha-ER)
treatment
vehicle E2
antibody
C/EBPalpha (Santa Cruz, serial no.:A2814)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
41197913
Reads aligned (%)
91.4
Duplicates removed (%)
40.2
Number of peaks
23610 (qval < 1E-05)

hg19

Number of total reads
41197913
Reads aligned (%)
90.9
Duplicates removed (%)
41.5
Number of peaks
23857 (qval < 1E-05)

Base call quality data from DBCLS SRA