Antigen

Antigen Class

RNA polymerase

Antigen

RNA polymerase II

Cell type

Cell type Class

Cell line

Cell type

S2

Source

Oregon R

Developmental Stage

late embryonic stage

Sample

source_name

S2 cell culture

cell type

S2; Schneider's Drosophila Line 2; Marco Blanchette's Lab

antibody

Drosophila Rpb1 antibody (Smith et al., Mol Cell. 2011 Dec 23;44(6):954-65)

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

ChIP libraries were prepared with the TruSeq DNA Sample Kit (Illumina #FC-121-2001) according to Illumina's instructions.

Sequencing Platform

instrument_model

Illumina HiSeq 2000

dm6

Number of total reads

16254805

Reads aligned (%)

96.3

Duplicates removed (%)

25.4

Number of peaks

8395 (qval < 1E-05)

dm3

Number of total reads

16254805

Reads aligned (%)

96.5

Duplicates removed (%)

23.7

Number of peaks

9361 (qval < 1E-05)