SRX306200
GSM1162770: fly input shEll ChIP 3; Drosophila melanogaster; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Cell line
Cell type
S2
Source
Oregon R
Developmental Stage
late embryonic stage

Attributes by original data submitter

Sample

source_name
S2 cell culture
cell type
S2; Schneider's Drosophila Line 2; Marco Blanchette's Lab
antibody
none

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
ChIP libraries were prepared with the TruSeq DNA Sample Kit (Illumina #FC-121-2001) according to Illumina's instructions.

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
30896823
Reads aligned (%)
96.1
Duplicates removed (%)
16.0
Number of peaks
0 (qval < 1E-05)

dm3

Number of total reads
30896823
Reads aligned (%)
96.8
Duplicates removed (%)
13.1
Number of peaks
3708 (qval < 1E-05)

Base call quality data from DBCLS SRA