Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Cell line
Cell type
S2
Source
Oregon R
Developmental Stage
late embryonic stage

Attributes by original data submitter

Sample

source_name
S2 cell culture
cell type
S2; Schneider's Drosophila Line 2; Marco Blanchette's Lab
antibody
none

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
ChIP libraries were prepared with the TruSeq DNA Sample Kit (Illumina #FC-121-2001) according to Illumina's instructions.

Sequencing Platform

instrument_model
Illumina HiSeq 2000

dm6

Number of total reads
19020623
Reads aligned (%)
94.9
Duplicates removed (%)
12.3
Number of peaks
2963 (qval < 1E-05)

dm3

Number of total reads
19020623
Reads aligned (%)
95.5
Duplicates removed (%)
9.8
Number of peaks
3133 (qval < 1E-05)

Base call quality data from DBCLS SRA