Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
Naive T cells
NA
NA

Attributes by original data submitter

Sample

source_name
Spleen CD4+ T cells
cell type
Naives T lymphocytes
number of culture days
0
strain
C57BL/6 Setdb1+/+
antibody
none

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
92588902
Reads aligned (%)
92.2
Duplicates removed (%)
66.3
Number of peaks
354 (qval < 1E-05)

mm9

Number of total reads
92588902
Reads aligned (%)
92.1
Duplicates removed (%)
66.0
Number of peaks
384 (qval < 1E-05)

Base call quality data from DBCLS SRA