Antigen

Antigen Class

TFs and others

Antigen

Sce

Cell type

Cell type Class

Cell line

Cell type

S2

Source

Oregon R

Developmental Stage

late embryonic stage

Sample

source_name

S2 Cell line

cell line

late embryo-derived cell line

strain

S2-DRSC

genotype

wild type

treatment

10 microMolar Cu2SO4

chip antibody

dRing (this study)

input dna code

B

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Chromatin was prepared according to the modENCODE procedure; RNA was extracted with Qiagen Rneasy kit DNA libraries were prepared according to Illumina's instructions; RNA libraries were prepared for sequencing using standard Illumina protocols

Sequencing Platform

instrument_model

Illumina HiSeq 2000

dm3

Number of total reads

17782111

Reads aligned (%)

66.4

Duplicates removed (%)

31.5

Number of peaks

8276 (qval < 1E-05)

dm6

Number of total reads

17782111

Reads aligned (%)

64.6

Duplicates removed (%)

33.1

Number of peaks

7522 (qval < 1E-05)