Antigen

Antigen Class

TFs and others

Antigen

Rorc

Cell type

Cell type Class

Liver

Cell type

Liver

MeSH Description

A large lobed glandular organ in the abdomen of vertebrates that is responsible for detoxification, metabolism, synthesis and storage of various substances.

Sample

source_name

liver

strain

C57BL/6

age

12 weeks old male

antibody

RORg

genotype/variation

Control

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

DNA or RNA is extracted using Qiagen kits Library contruction follows illumina kits Standard illumina method was used

Sequencing Platform

instrument_model

Illumina HiSeq 2000

mm10

Number of total reads

57618468

Reads aligned (%)

98.9

Duplicates removed (%)

18.0

Number of peaks

7072 (qval < 1E-05)

mm9

Number of total reads

57618468

Reads aligned (%)

98.6

Duplicates removed (%)

18.0

Number of peaks

7026 (qval < 1E-05)