SRX2985882
ChIP-seq of actG driven GFP tagged Sha in WT ovary

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Adult
Cell type
Ovary
NA
NA

Attributes by original data submitter

Sample

strain
actG>GFP-Sha
age
2-4 days
sex
female
tissue
ovary
sample_type
DNA
custom name
GFP ChIP for actG-GFP-Sha ovary

Sequenced DNA Library

library_name
ChIP-seq of actG driven GFP tagged Sha in WT ovary
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
NextSeq 500

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
25568395
Reads aligned (%)
94.0
Duplicates removed (%)
24.6
Number of peaks
1054 (qval < 1E-05)

dm3

Number of total reads
25568395
Reads aligned (%)
94.3
Duplicates removed (%)
23.6
Number of peaks
843 (qval < 1E-05)

Base call quality data from DBCLS SRA